CDS

Accession Number TCMCG016C12980
gbkey CDS
Protein Id OMO79206.1
Location complement(join(32941..33072,33227..33361,33436..33484,33581..33640,33754..33839,33939..34019,34207..34309,34397..34504,34924..35044,35290..35470))
Organism Corchorus capsularis
locus_tag CCACVL1_13838

Protein

Length 351aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01010447.1
Definition ATPase, V0 complex, c/d subunit [Corchorus capsularis]
Locus_tag CCACVL1_13838

EGGNOG-MAPPER Annotation

COG_category C
Description Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system
KEGG_TC 3.A.2.2
KEGG_Module M00160        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
KEGG_ko ko:K02146        [VIEW IN KEGG]
EC -
KEGG_Pathway ko00190        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko04142        [VIEW IN KEGG]
ko04145        [VIEW IN KEGG]
ko04721        [VIEW IN KEGG]
ko04966        [VIEW IN KEGG]
ko05110        [VIEW IN KEGG]
ko05120        [VIEW IN KEGG]
ko05152        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
ko05323        [VIEW IN KEGG]
map00190        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04145        [VIEW IN KEGG]
map04721        [VIEW IN KEGG]
map04966        [VIEW IN KEGG]
map05110        [VIEW IN KEGG]
map05120        [VIEW IN KEGG]
map05152        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
map05323        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005765        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005774        [VIEW IN EMBL-EBI]
GO:0005794        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006812        [VIEW IN EMBL-EBI]
GO:0006873        [VIEW IN EMBL-EBI]
GO:0006885        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007035        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008324        [VIEW IN EMBL-EBI]
GO:0008553        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015075        [VIEW IN EMBL-EBI]
GO:0015077        [VIEW IN EMBL-EBI]
GO:0015078        [VIEW IN EMBL-EBI]
GO:0015318        [VIEW IN EMBL-EBI]
GO:0015399        [VIEW IN EMBL-EBI]
GO:0015405        [VIEW IN EMBL-EBI]
GO:0015662        [VIEW IN EMBL-EBI]
GO:0015672        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016469        [VIEW IN EMBL-EBI]
GO:0016471        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0019829        [VIEW IN EMBL-EBI]
GO:0022804        [VIEW IN EMBL-EBI]
GO:0022853        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0022890        [VIEW IN EMBL-EBI]
GO:0030003        [VIEW IN EMBL-EBI]
GO:0030004        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030641        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033176        [VIEW IN EMBL-EBI]
GO:0034220        [VIEW IN EMBL-EBI]
GO:0036442        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042625        [VIEW IN EMBL-EBI]
GO:0042626        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043492        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044437        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044769        [VIEW IN EMBL-EBI]
GO:0045851        [VIEW IN EMBL-EBI]
GO:0046961        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050801        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051452        [VIEW IN EMBL-EBI]
GO:0051453        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0055067        [VIEW IN EMBL-EBI]
GO:0055080        [VIEW IN EMBL-EBI]
GO:0055082        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0090662        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098655        [VIEW IN EMBL-EBI]
GO:0098660        [VIEW IN EMBL-EBI]
GO:0098662        [VIEW IN EMBL-EBI]
GO:0098771        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]
GO:0098852        [VIEW IN EMBL-EBI]
GO:0099131        [VIEW IN EMBL-EBI]
GO:0099132        [VIEW IN EMBL-EBI]
GO:1902600        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTACGGATTCGAAGCTATGACATTCAACATCCATGGCGGTTACTTGGAAGCGATCGTGAGAGGTCATCGGGCGGGGCTCCTAACCGCCGCGGATTACAACAACCTTTGCCAATGCGAAACCCTTGACGATATCAAGATGCACCTCTCTGCCACTGAGTATGGCCCTTATCTCCAGAATGAGCCTTCACCATTGCATACGACTACGATTGTGGAGAAATGCACTCTTAAATTGGTTGATGAGTATAAACATATGTTGGCCCAAGCTACTGAGCCATTGTCCACCTTCCTAGAGTATATCACATATGGTCACATGATAGACAATGTTGTCTTGATTGTTACTGGAACCTTGCATGAGAGAGATGTTCAGGAGCTTCTGGAGAAGTGCCATCCTTTGGGCATGTTTGACAGCATTGCAACCCTAGCAGTTGCTCAGAATATGCGTGAACTCTATAGATTGGTTCTTGTTGACACTCCACTGGCTCCATATTTCTCCGAGTGTATTACCTCTGAGGACCTTGATGACATGAATATTGAAATTATGAGGAACACTCTCTACAAAGCATACCTTGAAGACTTTTACAAGTTTTGTCAGAAACTTGGTGGTGCAACAGCAGAGATCATGTCTGACCTCTTAGCCTTTGAGGCTGATAGGAGGGCCGTCAACATTACCATTAACAGCATTGGCACTGAGCTTACTCGAGATGATCGCCGGAAATTGTACTCTAACTTTGGCCTGCTTTATCCATATGGTCATGAGGAACTTGCTATCTGCGAGGATATTGACCAGGTTCGTGCTGTGATGGAAAAATATCCTCCCTACCAATCTATTTTCTCCAAATTATCGTATGGAGAGAGCCAGATGCTTGACAAGGCATTTTACGAAGAGGAAGTGAAAAGGCTCTGCTTAGCTTTTGAGCAACAGTTTCATTATGCTGTTTTCTTTGCCTACATGAGATTAAGGGAGCAGGAGATCAGGAACCTAATGTGGATTTCTGAATGTGTGGCTCAGAACCAAAAGTCTAGAGTTCATGACAGTGTTGTCTTTATATTTTAG
Protein:  
MYGFEAMTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLAQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRAVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF